BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A08LP1|AL428315
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1620 1721 0.0
>3x_Contig1620
Length = 12263
Score = 1721 bits (867), Expect = 0.0
Identities = 876/879 (99%), Gaps = 1/879 (0%)
Strand = Plus / Minus
Query: 1 gatcatccaatgaaacagaatcaccgatactttccaagactttttgaacgactgatacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5062 gatcatccaatgaaacagaatcaccgatactttccaagactttttgaacgactgatacgt 5003
Query: 61 gattaccattgagtttatcgtctctgaacctaagtagtttccatgcacctgattcctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5002 gattaccattgagtttatcgtctctgaacctaagtagtttccatgcacctgattcctgat 4943
Query: 121 ctttggaacattctacaattcttccgttcaatggctcctccatggccttgagctcattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4942 ctttggaacattctacaattcttccgttcaatggctcctccatggccttgagctcattcc 4883
Query: 181 attgtttgtcgtcgatttctatttctgcaaattttctataggttctctccaaaagctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4882 attgtttgtcgtcgatttctatttctgcaaattttctataggttctctccaaaagctcca 4823
Query: 241 aatcactcttagtaaagggttgttcgaagtcctgtattctattgttcacgtcattaccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 aatcactcttagtaaagggttgttcgaagtcctgtattctattgttcacgtcattaccac 4763
Query: 301 cttgccaaacgtacaaatggaaaagtggcttaacatcgtaattgtagtaaaacctgtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4762 cttgccaaacgtacaaatggaaaagtggcttaacatcgtaattgtagtaaaacctgtttt 4703
Query: 361 tatcgcttttaggtaaagatttgtcttctactacaggaggttcaatgatcagtttgaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4702 tatcgcttttaggtaaagatttgtcttctactacaggaggttcaatgatcagtttgaaat 4643
Query: 421 ccacagtattttctacttctggtttccatttcaaaaggtagctatctttaccaccaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4642 ccacagtattttctacttctggtttccatttcaaaaggtagctatctttaccaccaatat 4583
Query: 481 gatatgccgcttgtactggagtgaaaatkagaccatcagatacgtgtggaagtgaatcca 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4582 gatatgccgcttgtactggagtgaaaattagaccatcagatacgtgtggaagtgaatcca 4523
Query: 541 aggtctttgcaacttttgccaaatcataactgaaattcatatgtktcattgaaattttga 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4522 aggtctttgcaacttttgccaaatcataactgaaattcatatgtttcattgaaattttga 4463
Query: 601 atgggaaagtggaacatctatctggaaaatacgatcttaaatcgtaataaggtttgaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4462 atgggaaagtggaacatctatctggaaaatacgatcttaaatcgtaataaggtttgaaaa 4403
Query: 661 actctttgccaagatgagccaaacgggaacttgtaggcgattgaactaacgaacgaccat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4402 actctttgccaagatgagccaaacgggaacttgtaggcgattgaactaacgaacgaccat 4343
Query: 721 ttaccgcaa-gcagtcgaacatcaagtacctcagttccttcaacttggtcactggattag 779
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4342 ttaccgcaaggcagtcgaacatcaagtacctcagttccttcaacttggtcactggattag 4283
Query: 780 tttgcatgacaagttcaccatcaattaacgtaccgtcctgcaaagtctctaggagttctt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4282 tttgcatgacaagttcaccatcaattaacgtaccgtcctgcaaagtctctaggagttctt 4223
Query: 840 ttttattggcacggggcaaacatggaaatctaaatccat 878
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4222 ttttattggcacggggcaaacatggaaatctaaatccat 4184
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6563
Number of Sequences: 1807
Number of extensions: 6563
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)